Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Gm27702-201ENSMUST00000184512 56 ntBASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Cntnap3E9PY62 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Gm10576-201ENSMUST00000191927 825 ntBASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Gm43575-201ENSMUST00000196420 516 ntBASIC19.4■□□□□ 0.7
Cntnap3E9PY62 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap3E9PY62 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cntnap3E9PY62 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Gm12895-201ENSMUST00000122214 226 ntBASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap3E9PY62 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Gm10566-201ENSMUST00000086739 996 ntBASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap3E9PY62 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap3E9PY62 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.36■□□□□ 0.69
Cntnap3E9PY62 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Cntnap3E9PY62 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap3E9PY62 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms