Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Trim5E9PV98 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim5E9PV98 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.78■□□□□ 0.76
Trim5E9PV98 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim5E9PV98 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim5E9PV98 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim5E9PV98 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim5E9PV98 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim5E9PV98 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim5E9PV98 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim5E9PV98 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.77■□□□□ 0.76
Trim5E9PV98 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim5E9PV98 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim5E9PV98 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim5E9PV98 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Gm9731-201ENSMUST00000209480 747 ntBASIC19.76■□□□□ 0.75
Trim5E9PV98 Il3ra-202ENSMUST00000223589 738 ntBASIC19.76■□□□□ 0.75
Trim5E9PV98 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim5E9PV98 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim5E9PV98 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.75■□□□□ 0.75
Trim5E9PV98 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Gm11355-201ENSMUST00000121120 306 ntBASIC19.75■□□□□ 0.75
Trim5E9PV98 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim5E9PV98 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim5E9PV98 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Trim5E9PV98 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.74■□□□□ 0.75
Trim5E9PV98 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trim5E9PV98 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim5E9PV98 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim5E9PV98 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim5E9PV98 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.73■□□□□ 0.75
Trim5E9PV98 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Trim5E9PV98 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim5E9PV98 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim5E9PV98 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim5E9PV98 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim5E9PV98 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim5E9PV98 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim5E9PV98 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim5E9PV98 Gm11950-201ENSMUST00000121615 838 ntBASIC19.71■□□□□ 0.75
Trim5E9PV98 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.71■□□□□ 0.75
Trim5E9PV98 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Gm37025-201ENSMUST00000195159 829 ntBASIC19.71■□□□□ 0.75
Trim5E9PV98 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim5E9PV98 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim5E9PV98 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim5E9PV98 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim5E9PV98 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim5E9PV98 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms