Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ptchd4B9EKX1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ptchd4B9EKX1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Fst-202ENSMUST00000223640 2612 ntBASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Gm21362-201ENSMUST00000194272 928 ntBASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Gm18101-201ENSMUST00000215769 548 ntBASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.96■□□□□ 0.63
Ptchd4B9EKX1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ptchd4B9EKX1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 AA414768-201ENSMUST00000121924 1257 ntBASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ptchd4B9EKX1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ptchd4B9EKX1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms