Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp42B2RQC2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp42B2RQC2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp42B2RQC2 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.65■□□□□ 0.9
Usp42B2RQC2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp42B2RQC2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp42B2RQC2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.64■□□□□ 0.9
Usp42B2RQC2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Mir1199-201ENSMUST00000117015 119 ntBASIC20.64■□□□□ 0.89
Usp42B2RQC2 Gm10517-202ENSMUST00000192970 758 ntBASIC20.64■□□□□ 0.89
Usp42B2RQC2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Gm10812-201ENSMUST00000099864 546 ntBASIC20.64■□□□□ 0.89
Usp42B2RQC2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp42B2RQC2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp42B2RQC2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Gm4974-201ENSMUST00000209974 875 ntBASIC20.62■□□□□ 0.89
Usp42B2RQC2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp42B2RQC2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp42B2RQC2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp42B2RQC2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.59■□□□□ 0.89
Usp42B2RQC2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Usp42B2RQC2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp42B2RQC2 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.58■□□□□ 0.88
Usp42B2RQC2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms