Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Gm9987-201ENSMUST00000069768 567 ntBASIC18.56■□□□□ 0.56
Scn1aA2APX8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.56■□□□□ 0.56
Scn1aA2APX8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn1aA2APX8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.54■□□□□ 0.56
Scn1aA2APX8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn1aA2APX8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.53■□□□□ 0.56
Scn1aA2APX8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Gm37025-201ENSMUST00000195159 829 ntBASIC18.53■□□□□ 0.56
Scn1aA2APX8 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.53■□□□□ 0.56
Scn1aA2APX8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.53■□□□□ 0.56
Scn1aA2APX8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn1aA2APX8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.53■□□□□ 0.56
Scn1aA2APX8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.52■□□□□ 0.56
Scn1aA2APX8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scn1aA2APX8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn1aA2APX8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.52■□□□□ 0.55
Scn1aA2APX8 Gm13836-201ENSMUST00000121159 501 ntBASIC18.52■□□□□ 0.55
Scn1aA2APX8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.52■□□□□ 0.55
Scn1aA2APX8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn1aA2APX8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
Scn1aA2APX8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.51■□□□□ 0.55
Scn1aA2APX8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn1aA2APX8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn1aA2APX8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.5■□□□□ 0.55
Scn1aA2APX8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn1aA2APX8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.49■□□□□ 0.55
Scn1aA2APX8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn1aA2APX8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms