Protein–RNA interactions for Protein: A2AH22

Ambra1, Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1A2AH22 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ambra1A2AH22 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ambra1A2AH22 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ambra1A2AH22 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Gm27459-201ENSMUST00000184860 107 ntBASIC21.19■□□□□ 0.98
Ambra1A2AH22 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.19■□□□□ 0.98
Ambra1A2AH22 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Mir8112-201ENSMUST00000184382 131 ntBASIC21.18■□□□□ 0.98
Ambra1A2AH22 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
Ambra1A2AH22 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ambra1A2AH22 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Gm28659-201ENSMUST00000188013 759 ntBASIC21.17■□□□□ 0.98
Ambra1A2AH22 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ambra1A2AH22 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ambra1A2AH22 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ambra1A2AH22 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Gm6443-201ENSMUST00000203599 874 ntBASIC21.15■□□□□ 0.98
Ambra1A2AH22 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ambra1A2AH22 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.15■□□□□ 0.98
Ambra1A2AH22 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ambra1A2AH22 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.14■□□□□ 0.97
Ambra1A2AH22 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ambra1A2AH22 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.14■□□□□ 0.97
Ambra1A2AH22 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ambra1A2AH22 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ambra1A2AH22 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ambra1A2AH22 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.12■□□□□ 0.97
Ambra1A2AH22 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.12■□□□□ 0.97
Ambra1A2AH22 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ambra1A2AH22 Gm13884-201ENSMUST00000118103 829 ntBASIC21.12■□□□□ 0.97
Ambra1A2AH22 Mir8098-201ENSMUST00000184011 137 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms