Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lnp1A0A1B0GSK3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Dio3-201ENSMUST00000097228 1449 ntBASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lnp1A0A1B0GSK3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm12441-201ENSMUST00000121806 588 ntBASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lnp1A0A1B0GSK3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm11249-201ENSMUST00000117071 859 ntBASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lnp1A0A1B0GSK3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm20049-201ENSMUST00000219950 730 ntBASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lnp1A0A1B0GSK3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lnp1A0A1B0GSK3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms