Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Gm2399-201ENSMUST00000104944 225 ntBASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv17A0A140T8P8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Gm26524-201ENSMUST00000192339 390 ntBASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv17A0A140T8P8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trbv17A0A140T8P8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.5□□□□□ -0.25
Trbv17A0A140T8P8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms