Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.58■□□□□ 0.4
Ccdc194A0A140LIT1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc194A0A140LIT1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Ccdc194A0A140LIT1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Idnk-204ENSMUST00000226010 1898 ntBASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc194A0A140LIT1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc194A0A140LIT1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Gm8495-201ENSMUST00000188740 694 ntBASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.53■□□□□ 0.4
Ccdc194A0A140LIT1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms