Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm10138-203ENSMUST00000206952 366 ntBASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rarb-207ENSMUST00000225921 2756 ntBASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm18666-201ENSMUST00000190039 958 ntBASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9-4A0A0B4J1K2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm15375-201ENSMUST00000119510 849 ntBASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav9-4A0A0B4J1K2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Mir2861-201ENSMUST00000175539 82 ntBASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9-4A0A0B4J1K2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm13168-201ENSMUST00000121771 632 ntBASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms