Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trbv1A0A0B4J1G7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm42778-201ENSMUST00000199644 553 ntBASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv1A0A0B4J1G7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv1A0A0B4J1G7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv1A0A0B4J1G7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trbv1A0A0B4J1G7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm38205-201ENSMUST00000192243 258 ntBASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv1A0A0B4J1G7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv1A0A0B4J1G7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms