Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm4968-201ENSMUST00000071458 858 ntBASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6d-7A0A075B6B0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-7A0A075B6B0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6d-7A0A075B6B0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Gm13148-201ENSMUST00000118892 745 ntBASIC13.61□□□□□ -0.23
Trav6d-7A0A075B6B0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms