Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav14n-3A0A075B645 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Gm11421-201ENSMUST00000122124 294 ntBASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav14n-3A0A075B645 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Trav14n-3A0A075B645 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav14n-3A0A075B645 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.33□□□□□ -0.27
Trav14n-3A0A075B645 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav14n-3A0A075B645 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav14n-3A0A075B645 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms