Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm9013-201ENSMUST00000132939 882 ntBASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Mir1668-201ENSMUST00000184114 107 ntBASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm5587-201ENSMUST00000206270 674 ntBASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm29791-202ENSMUST00000207888 369 ntBASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Gm13401-201ENSMUST00000117074 291 ntBASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Gm37025-201ENSMUST00000195159 829 ntBASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8n-2A0A075B633 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Gm9731-201ENSMUST00000209480 747 ntBASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Iqck-206ENSMUST00000208658 2891 ntBASIC16.16■□□□□ 0.18
Trav8n-2A0A075B633 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8n-2A0A075B633 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav8n-2A0A075B633 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav8n-2A0A075B633 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav8n-2A0A075B633 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Gm27704-201ENSMUST00000185094 107 ntBASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Gm7370-201ENSMUST00000219471 767 ntBASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav8n-2A0A075B633 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms