Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav1A0A075B5Z4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Gm11643-201ENSMUST00000119578 864 ntBASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.4■□□□□ 0.22
Trav1A0A075B5Z4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Trav1A0A075B5Z4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav1A0A075B5Z4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav1A0A075B5Z4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav1A0A075B5Z4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms