Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv4A0A075B5I2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv4A0A075B5I2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv4A0A075B5I2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv4A0A075B5I2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trbv4A0A075B5I2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv4A0A075B5I2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.67■□□□□ 0.42
Trbv4A0A075B5I2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv4A0A075B5I2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv4A0A075B5I2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms