Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm25418-201ENSMUST00000104214 129 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm9427-201ENSMUST00000116187 651 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm14711-201ENSMUST00000117056 217 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm12332-201ENSMUST00000121397 922 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm3757-201ENSMUST00000125878 675 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm25907-201ENSMUST00000158486 125 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Mir6374-201ENSMUST00000184003 107 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm29475-201ENSMUST00000190767 312 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm37631-201ENSMUST00000192275 364 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm2623-201ENSMUST00000199229 286 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm42459-201ENSMUST00000199679 742 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm7721-201ENSMUST00000200446 546 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr151-202ENSMUST00000221099 929 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm6776-201ENSMUST00000057752 900 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim3Q9R1R2 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm15012-201ENSMUST00000119176 106 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm23546-201ENSMUST00000158211 137 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm17091-201ENSMUST00000163248 357 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm8480-201ENSMUST00000190350 698 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm44330-201ENSMUST00000200106 143 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim3Q9R1R2 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Trim3Q9R1R2 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms