Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm23623-201ENSMUST00000082461 107 ntBASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.38□□□□□ -1.55
Tubb3Q9ERD7 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm6913-201ENSMUST00000100019 348 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm16200-201ENSMUST00000120385 331 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm13080-201ENSMUST00000120556 420 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm13259-201ENSMUST00000120792 456 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm13430-201ENSMUST00000121366 288 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm12444-201ENSMUST00000121512 877 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm12041-201ENSMUST00000121606 602 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm15116-201ENSMUST00000122248 663 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm23111-201ENSMUST00000122652 105 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Samd15-201ENSMUST00000169669 1194 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm2617-201ENSMUST00000185690 1066 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm18426-201ENSMUST00000191874 973 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm43582-201ENSMUST00000196149 343 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm44319-201ENSMUST00000196974 93 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm45474-201ENSMUST00000209471 408 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm30738-201ENSMUST00000221346 502 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm23104-201ENSMUST00000083722 104 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm25682-201ENSMUST00000083942 164 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.37□□□□□ -1.55
Tubb3Q9ERD7 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms