Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.58□□□□□ -1.68
Cdc40Q9DC48 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm22020-201ENSMUST00000104358 136 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm12039-201ENSMUST00000118219 180 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm11346-201ENSMUST00000118346 704 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm16463-201ENSMUST00000120527 721 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm27528-201ENSMUST00000183544 205 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm6717-201ENSMUST00000185549 838 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm2497-201ENSMUST00000189539 601 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm43524-201ENSMUST00000197278 298 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm18011-201ENSMUST00000203717 565 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm19936-201ENSMUST00000216414 838 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm6906-201ENSMUST00000218014 569 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Cdc40Q9DC48 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm24855-201ENSMUST00000104848 97 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm15297-201ENSMUST00000117795 290 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm8145-201ENSMUST00000118220 745 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm3531-201ENSMUST00000162698 489 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 V1rg10-201ENSMUST00000183378 937 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Mir7222-201ENSMUST00000183740 75 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm19206-201ENSMUST00000186401 827 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm28660-201ENSMUST00000186496 253 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm37682-201ENSMUST00000191776 522 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Cdc40Q9DC48 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cdc40Q9DC48 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms