Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CopaQ8CIE6 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CopaQ8CIE6 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CopaQ8CIE6 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
CopaQ8CIE6 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
CopaQ8CIE6 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm7206-201ENSMUST00000117730 508 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm14301-201ENSMUST00000120181 324 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm13341-201ENSMUST00000120780 672 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm5383-201ENSMUST00000121177 617 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm26352-201ENSMUST00000158223 125 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Mir1963-201ENSMUST00000158594 59 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Scarna6-201ENSMUST00000158656 265 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm23205-201ENSMUST00000158671 103 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm3170-201ENSMUST00000168753 850 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm20397-201ENSMUST00000174520 362 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm3348-201ENSMUST00000177813 850 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm25598-201ENSMUST00000179031 107 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm20574-201ENSMUST00000182867 917 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm9320-201ENSMUST00000184151 473 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm37213-201ENSMUST00000193077 586 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm5309-201ENSMUST00000197416 677 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm44681-201ENSMUST00000208447 842 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CopaQ8CIE6 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm25758-201ENSMUST00000103987 129 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm6134-201ENSMUST00000117265 171 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm16394-201ENSMUST00000117289 675 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm13488-201ENSMUST00000120419 179 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm14601-201ENSMUST00000120892 236 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm22158-201ENSMUST00000158411 126 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm22693-201ENSMUST00000175049 442 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm28503-201ENSMUST00000185966 147 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm37751-201ENSMUST00000192440 1198 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm43724-201ENSMUST00000197516 226 ntBASIC5.48□□□□□ -1.53
CopaQ8CIE6 Gm18325-201ENSMUST00000203228 835 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms