Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm11486-201ENSMUST00000107322 478 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm15390-201ENSMUST00000120323 738 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm26925-201ENSMUST00000182470 957 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm27528-201ENSMUST00000183544 205 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm27688-201ENSMUST00000183634 91 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Mir7037-201ENSMUST00000184414 65 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm28384-201ENSMUST00000189079 463 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm37241-201ENSMUST00000191736 523 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm38011-201ENSMUST00000193312 279 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm10048-201ENSMUST00000194196 372 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 CT010480.1-201ENSMUST00000223612 363 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 AV026068-231ENSMUST00000225862 482 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm31258-201ENSMUST00000194532 3297 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm23692-201ENSMUST00000101881 160 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm15125-201ENSMUST00000116185 800 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm14086-201ENSMUST00000117152 173 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm15791-201ENSMUST00000120365 319 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm12096-201ENSMUST00000121149 829 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm15388-201ENSMUST00000121578 726 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm26424-201ENSMUST00000122530 104 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm23250-201ENSMUST00000157444 267 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm24860-201ENSMUST00000158457 276 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm3091-201ENSMUST00000163408 484 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Mir3080-201ENSMUST00000175010 79 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm4859-201ENSMUST00000199625 787 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm44048-201ENSMUST00000204531 361 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm17999-201ENSMUST00000211568 542 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 AC120394.1-201ENSMUST00000217153 351 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm36501-201ENSMUST00000221857 745 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm25260-201ENSMUST00000083053 134 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
Brf1Q8CFK2 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm24170-201ENSMUST00000104124 133 ntBASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Brf1Q8CFK2 Gm11912-201ENSMUST00000117235 264 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms