Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm13815-201ENSMUST00000119963 412 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm12583-201ENSMUST00000120677 853 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm5391-201ENSMUST00000121155 613 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm24628-201ENSMUST00000122761 289 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm24402-201ENSMUST00000157873 91 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Olfr331-202ENSMUST00000170501 957 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm27039-201ENSMUST00000182438 962 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm27355-201ENSMUST00000185045 128 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm44330-201ENSMUST00000200106 143 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm29793-201ENSMUST00000202874 460 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Supt4b-201ENSMUST00000214434 351 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Mir30b-201ENSMUST00000083542 96 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm14512-201ENSMUST00000117924 230 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm14603-201ENSMUST00000121275 448 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm23121-201ENSMUST00000157653 173 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm24751-201ENSMUST00000157844 102 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm5558-201ENSMUST00000178933 495 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm29036-201ENSMUST00000189967 877 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm37682-201ENSMUST00000191776 522 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm37881-201ENSMUST00000193001 421 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm44319-201ENSMUST00000196974 93 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm42579-201ENSMUST00000200512 734 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm42458-201ENSMUST00000201914 369 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm44523-201ENSMUST00000205616 417 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm18258-201ENSMUST00000210413 542 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm18850-201ENSMUST00000211578 388 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm19936-201ENSMUST00000216414 838 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm6065-201ENSMUST00000081336 492 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm6043-201ENSMUST00000099961 492 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.79□□□□□ -1.64
Trub1Q8C0D0 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm24578-201ENSMUST00000103970 129 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm12062-201ENSMUST00000117533 259 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm11781-201ENSMUST00000118328 472 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Gm13924-201ENSMUST00000119899 486 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.78□□□□□ -1.64
Trub1Q8C0D0 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms