Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm13815-201ENSMUST00000119963 412 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm7258-201ENSMUST00000179317 300 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm26607-201ENSMUST00000180661 867 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm27414-201ENSMUST00000185033 381 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm36964-201ENSMUST00000191876 198 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm36983-201ENSMUST00000192280 1102 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm44820-201ENSMUST00000207420 396 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm18940-201ENSMUST00000222518 871 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm24166-201ENSMUST00000082724 135 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm42725-201ENSMUST00000199296 4193 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Defa-ps14-201ENSMUST00000121373 418 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm17953-201ENSMUST00000192061 667 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm37581-201ENSMUST00000192371 988 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm38221-201ENSMUST00000195146 365 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm33973-201ENSMUST00000195148 534 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 AC158633.1-201ENSMUST00000219892 649 ntBASIC3.71□□□□□ -1.82
NipblQ6KCD5 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NipblQ6KCD5 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
NipblQ6KCD5 Gm43314-201ENSMUST00000196744 2231 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm11486-201ENSMUST00000107322 478 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 AC159896.3-201ENSMUST00000215904 3835 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm45183-201ENSMUST00000207937 1497 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 AC122263.1-201ENSMUST00000228636 2805 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm43229-201ENSMUST00000201812 1850 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm12231-201ENSMUST00000119447 695 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm5383-201ENSMUST00000121177 617 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm23837-201ENSMUST00000122656 286 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Mir7009-201ENSMUST00000184519 64 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm28195-201ENSMUST00000186992 372 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm43559-201ENSMUST00000198755 466 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm5885-202ENSMUST00000203357 528 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm45628-201ENSMUST00000210849 274 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC3.7□□□□□ -1.82
NipblQ6KCD5 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NipblQ6KCD5 Gm37057-201ENSMUST00000192624 1916 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Gm11409-201ENSMUST00000118621 403 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Gm22343-201ENSMUST00000122648 286 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC3.69□□□□□ -1.82
NipblQ6KCD5 Gm25535-201ENSMUST00000175364 125 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NipblQ6KCD5 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.69□□□□□ -1.82
NipblQ6KCD5 AC121978.1-201ENSMUST00000228357 380 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC3.69□□□□□ -1.82
NipblQ6KCD5 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NipblQ6KCD5 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NipblQ6KCD5 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms