Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm37881-201ENSMUST00000193001 421 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gm44456-201ENSMUST00000196554 89 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gm18330-201ENSMUST00000199246 547 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gm42824-201ENSMUST00000199361 247 ntBASIC4.83□□□□□ -1.64
Six1Q62231 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Six1Q62231 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Six1Q62231 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.83□□□□□ -1.64
Six1Q62231 Gm18306-201ENSMUST00000207338 569 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gm7588-201ENSMUST00000216866 571 ntBASIC4.83□□□□□ -1.64
Six1Q62231 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.83□□□□□ -1.64
Six1Q62231 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gm3086-202ENSMUST00000221248 310 ntBASIC4.83□□□□□ -1.64
Six1Q62231 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.83□□□□□ -1.64
Six1Q62231 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Six1Q62231 Gm6065-201ENSMUST00000081336 492 ntBASIC4.83□□□□□ -1.64
Six1Q62231 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Six1Q62231 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Six1Q62231 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Six1Q62231 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Six1Q62231 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Six1Q62231 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.83□□□□□ -1.64
Six1Q62231 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Six1Q62231 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Six1Q62231 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Mir1188-201ENSMUST00000116756 120 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Gm12189-201ENSMUST00000119779 912 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Mir3090-201ENSMUST00000175597 87 ntBASIC4.82□□□□□ -1.64
Six1Q62231 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.82□□□□□ -1.64
Six1Q62231 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Gm8874-201ENSMUST00000196826 286 ntBASIC4.82□□□□□ -1.64
Six1Q62231 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.82□□□□□ -1.64
Six1Q62231 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.82□□□□□ -1.64
Six1Q62231 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Six1Q62231 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.82□□□□□ -1.64
Six1Q62231 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Six1Q62231 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.82□□□□□ -1.64
Six1Q62231 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Six1Q62231 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Six1Q62231 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 AC123705.3-201ENSMUST00000223531 2069 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.82□□□□□ -1.64
Six1Q62231 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.82□□□□□ -1.64
Six1Q62231 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Six1Q62231 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Six1Q62231 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Six1Q62231 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.81□□□□□ -1.64
Six1Q62231 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Six1Q62231 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Six1Q62231 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Six1Q62231 Gm12401-201ENSMUST00000118435 228 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm12231-201ENSMUST00000119447 695 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm8430-201ENSMUST00000119780 471 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm15530-201ENSMUST00000122206 555 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Mir1903-201ENSMUST00000122574 80 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm20545-201ENSMUST00000174739 210 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm6075-201ENSMUST00000186816 486 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm28769-201ENSMUST00000190176 615 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.81□□□□□ -1.64
Six1Q62231 Gm4410-201ENSMUST00000199349 686 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm42643-201ENSMUST00000200504 279 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Six1Q62231 Gm43894-201ENSMUST00000203274 688 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm44402-201ENSMUST00000203677 238 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Gm3816-201ENSMUST00000209803 433 ntBASIC4.81□□□□□ -1.64
Six1Q62231 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Six1Q62231 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms