Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm24935-201ENSMUST00000103770 110 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm14854-201ENSMUST00000117758 841 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm42830-201ENSMUST00000196642 313 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm42694-201ENSMUST00000196951 358 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm45857-201ENSMUST00000212207 356 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm19095-201ENSMUST00000220533 730 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm22868-201ENSMUST00000083955 164 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm6177-201ENSMUST00000085589 465 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc88aQ5SNZ0 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm18258-201ENSMUST00000210413 542 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Mir383-201ENSMUST00000083523 70 ntBASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc88aQ5SNZ0 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm12186-201ENSMUST00000119050 945 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm12852-201ENSMUST00000119478 719 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm14725-201ENSMUST00000120324 828 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm11931-201ENSMUST00000121630 447 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm14500-201ENSMUST00000121647 113 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Snord59a-201ENSMUST00000082844 74 ntBASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc88aQ5SNZ0 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc88aQ5SNZ0 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms