Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm6587-201ENSMUST00000120219 613 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm25184-201ENSMUST00000157753 163 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ear-ps9-201ENSMUST00000161963 460 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm4332-201ENSMUST00000196114 346 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm6105-201ENSMUST00000200580 624 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 AC156576.2-202ENSMUST00000222525 411 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 AC138667.2-201ENSMUST00000224880 598 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Mir421-201ENSMUST00000083575 76 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 AC138765.2-202ENSMUST00000228418 3435 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm42503-201ENSMUST00000199080 3706 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Gm2987-201ENSMUST00000187673 1693 ntBASIC11.14□□□□□ -0.63
Trim41Q5NCC3 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm42661-201ENSMUST00000202364 1442 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm42561-201ENSMUST00000202563 1442 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm13193-201ENSMUST00000117275 225 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm11352-201ENSMUST00000119264 517 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm15034-201ENSMUST00000120043 349 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Mir3095-201ENSMUST00000175552 87 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm17916-202ENSMUST00000187634 1187 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm18969-201ENSMUST00000189423 730 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm37477-201ENSMUST00000195215 884 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm7626-201ENSMUST00000195801 353 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 AC151971.3-201ENSMUST00000214694 404 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm6474-201ENSMUST00000223250 699 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 AC165106.1-201ENSMUST00000227580 408 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Mir218-2-201ENSMUST00000083649 110 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Gm13854-201ENSMUST00000121183 1679 ntBASIC11.13□□□□□ -0.63
Trim41Q5NCC3 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim41Q5NCC3 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm45876-201ENSMUST00000212698 2709 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm15113-201ENSMUST00000119280 836 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm4789-201ENSMUST00000121708 1216 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm13738-201ENSMUST00000122437 469 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm4487-201ENSMUST00000150617 442 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm8009-201ENSMUST00000191672 436 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm37418-201ENSMUST00000195031 274 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm6057-201ENSMUST00000195927 314 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm45082-201ENSMUST00000206082 601 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm19181-201ENSMUST00000218891 940 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 AC167222.2-201ENSMUST00000220014 295 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 AC154481.1-201ENSMUST00000223532 331 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 AC125539.2-201ENSMUST00000228339 753 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm17165-201ENSMUST00000096155 493 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm10855-201ENSMUST00000100426 2541 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm43092-201ENSMUST00000202986 1854 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Gm45322-201ENSMUST00000211642 1361 ntBASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim41Q5NCC3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gm44215-201ENSMUST00000204910 2711 ntBASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim41Q5NCC3 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms