Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm12893-201ENSMUST00000121732 275 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm22601-201ENSMUST00000157595 250 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm22940-201ENSMUST00000158560 155 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm43044-201ENSMUST00000198091 379 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm18330-201ENSMUST00000199246 547 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm22741-201ENSMUST00000083438 165 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Mir17-201ENSMUST00000083574 84 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trafd1Q3UDK1 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm23193-201ENSMUST00000102427 82 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm9208-201ENSMUST00000120468 948 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm13867-201ENSMUST00000120844 395 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm12041-201ENSMUST00000121606 602 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm25179-201ENSMUST00000122632 128 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm23121-201ENSMUST00000157653 173 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm23513-201ENSMUST00000158181 133 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm16566-201ENSMUST00000160387 910 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm20674-201ENSMUST00000177452 369 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm9443-201ENSMUST00000188406 816 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm8480-201ENSMUST00000190350 698 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm10292-202ENSMUST00000193165 585 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm37355-201ENSMUST00000193345 606 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm22897-202ENSMUST00000197782 127 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm44523-201ENSMUST00000205616 417 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm44779-201ENSMUST00000206937 708 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm44623-201ENSMUST00000207934 434 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm2607-201ENSMUST00000212389 627 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm8911-201ENSMUST00000213986 652 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trafd1Q3UDK1 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm22272-201ENSMUST00000104039 134 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm24855-201ENSMUST00000104848 97 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm13771-201ENSMUST00000117988 238 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm3267-201ENSMUST00000118671 473 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm11366-201ENSMUST00000119279 429 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm15480-201ENSMUST00000120442 519 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm13487-201ENSMUST00000122240 864 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm24685-201ENSMUST00000157764 285 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm25534-201ENSMUST00000175365 125 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm27160-201ENSMUST00000184837 199 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Mir7028-201ENSMUST00000185016 64 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm20056-201ENSMUST00000194813 519 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trafd1Q3UDK1 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms