Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PrkdcP97313 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm6900-201ENSMUST00000178971 342 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm37239-201ENSMUST00000193510 141 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC3.16□□□□□ -1.9
PrkdcP97313 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm31258-201ENSMUST00000194532 3297 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 AC115970.1-201ENSMUST00000218910 1758 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm22115-201ENSMUST00000103976 133 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm23923-201ENSMUST00000104108 133 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm14985-201ENSMUST00000118693 786 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm12041-201ENSMUST00000121606 602 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.16□□□□□ -1.9
PrkdcP97313 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.16□□□□□ -1.9
PrkdcP97313 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm38070-201ENSMUST00000191850 6480 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PrkdcP97313 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PrkdcP97313 Gm14739-201ENSMUST00000120424 802 ntBASIC3.15□□□□□ -1.9
PrkdcP97313 Gm15885-201ENSMUST00000122114 388 ntBASIC3.15□□□□□ -1.9
PrkdcP97313 Gm4725-201ENSMUST00000151048 587 ntBASIC3.15□□□□□ -1.9
PrkdcP97313 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PrkdcP97313 Gm38257-201ENSMUST00000195881 2761 ntBASIC3.15□□□□□ -1.9
PrkdcP97313 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PrkdcP97313 Gm10237-201ENSMUST00000078393 273 ntBASIC3.15□□□□□ -1.9
PrkdcP97313 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PrkdcP97313 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm8666-201ENSMUST00000117517 292 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm24774-201ENSMUST00000157384 134 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Mir6905-201ENSMUST00000184228 70 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Mir6914-201ENSMUST00000184999 69 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Gm45080-201ENSMUST00000206648 283 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PrkdcP97313 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
PrkdcP97313 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
PrkdcP97313 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm42910-201ENSMUST00000198917 2921 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Gm9317-201ENSMUST00000197055 862 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.15□□□□□ -1.91
PrkdcP97313 AC122305.2-201ENSMUST00000215148 834 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
PrkdcP97313 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PrkdcP97313 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Gm43281-201ENSMUST00000202522 2704 ntBASIC3.15□□□□□ -1.91
PrkdcP97313 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PrkdcP97313 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm37534-201ENSMUST00000194483 5222 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PrkdcP97313 Gm15534-201ENSMUST00000137642 562 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PrkdcP97313 Mir5106-201ENSMUST00000174936 73 ntBASIC3.14□□□□□ -1.91
PrkdcP97313 Mir6385-201ENSMUST00000184295 105 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms