Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC131586.2-202ENSMUST00000227016 2705 ntBASIC7.19□□□□□ -1.26
Cux1P53564 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cux1P53564 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cux1P53564 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Cux1P53564 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.19□□□□□ -1.26
Cux1P53564 Gm15786-201ENSMUST00000121079 450 ntBASIC7.19□□□□□ -1.26
Cux1P53564 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC7.19□□□□□ -1.26
Cux1P53564 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.19□□□□□ -1.26
Cux1P53564 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Cux1P53564 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC7.19□□□□□ -1.26
Cux1P53564 AC154788.1-201ENSMUST00000225003 340 ntBASIC7.19□□□□□ -1.26
Cux1P53564 AC154592.1-201ENSMUST00000225784 574 ntBASIC7.19□□□□□ -1.26
Cux1P53564 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.19□□□□□ -1.26
Cux1P53564 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Cux1P53564 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Gm13195-201ENSMUST00000117229 261 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Gm22204-201ENSMUST00000122654 327 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Gm25224-201ENSMUST00000158195 68 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Gm30280-201ENSMUST00000192214 262 ntBASIC7.18□□□□□ -1.26
Cux1P53564 AC156798.1-201ENSMUST00000220508 224 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC7.18□□□□□ -1.26
Cux1P53564 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Cux1P53564 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 AC144772.1-201ENSMUST00000226372 2398 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Cux1P53564 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 AC154227.1-201ENSMUST00000228809 2467 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Gm19514-201ENSMUST00000206856 4489 ntBASIC7.18□□□□□ -1.26
Cux1P53564 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Cux1P53564 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.18□□□□□ -1.26
Cux1P53564 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Gm14790-201ENSMUST00000117760 1293 ntBASIC7.17□□□□□ -1.26
Cux1P53564 Gm12994-201ENSMUST00000119601 447 ntBASIC7.17□□□□□ -1.26
Cux1P53564 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Gm43828-201ENSMUST00000196890 639 ntBASIC7.17□□□□□ -1.26
Cux1P53564 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC7.17□□□□□ -1.26
Cux1P53564 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Cux1P53564 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Cux1P53564 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Cux1P53564 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Cux1P53564 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Mir292-201ENSMUST00000104847 82 ntBASIC7.17□□□□□ -1.26
Cux1P53564 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC7.17□□□□□ -1.26
Cux1P53564 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC7.17□□□□□ -1.26
Cux1P53564 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Cux1P53564 Gm17149-201ENSMUST00000164712 375 ntBASIC7.17□□□□□ -1.26
Cux1P53564 CR974429.1-201ENSMUST00000220877 827 ntBASIC7.17□□□□□ -1.26
Cux1P53564 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cux1P53564 AC142245.1-201ENSMUST00000226611 1505 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm31258-201ENSMUST00000194532 3297 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cux1P53564 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Cux1P53564 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 AC139754.3-201ENSMUST00000220444 1627 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm13737-201ENSMUST00000119793 232 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm23789-201ENSMUST00000122536 301 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Cux1P53564 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC7.16□□□□□ -1.26
Cux1P53564 Gm25965-201ENSMUST00000157170 93 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm24745-201ENSMUST00000157840 85 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm29793-201ENSMUST00000202874 460 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm44054-201ENSMUST00000203814 372 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 AC154296.3-201ENSMUST00000214427 712 ntBASIC7.16□□□□□ -1.26
Cux1P53564 AC132384.5-201ENSMUST00000218562 226 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Gm19095-201ENSMUST00000220533 730 ntBASIC7.16□□□□□ -1.26
Cux1P53564 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Cux1P53564 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC7.16□□□□□ -1.26
Cux1P53564 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms