Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GdnfP48540 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.65□□□□□ -1.5
GdnfP48540 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GdnfP48540 Gm6510-201ENSMUST00000195916 574 ntBASIC5.65□□□□□ -1.5
GdnfP48540 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.65□□□□□ -1.5
GdnfP48540 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GdnfP48540 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
GdnfP48540 Gm45232-201ENSMUST00000207811 162 ntBASIC5.65□□□□□ -1.5
GdnfP48540 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.65□□□□□ -1.5
GdnfP48540 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.65□□□□□ -1.5
GdnfP48540 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.65□□□□□ -1.5
GdnfP48540 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.65□□□□□ -1.5
GdnfP48540 Gm33312-201ENSMUST00000222443 332 ntBASIC5.65□□□□□ -1.5
GdnfP48540 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.65□□□□□ -1.5
GdnfP48540 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.65□□□□□ -1.5
GdnfP48540 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GdnfP48540 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GdnfP48540 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GdnfP48540 Gm7808-201ENSMUST00000082002 387 ntBASIC5.65□□□□□ -1.5
GdnfP48540 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GdnfP48540 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GdnfP48540 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.65□□□□□ -1.51
GdnfP48540 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.65□□□□□ -1.51
GdnfP48540 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
GdnfP48540 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.65□□□□□ -1.51
GdnfP48540 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.65□□□□□ -1.51
GdnfP48540 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GdnfP48540 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm9874-202ENSMUST00000194957 1464 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Gm26396-201ENSMUST00000104093 132 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm14050-201ENSMUST00000117052 346 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm8202-201ENSMUST00000117682 310 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm15310-201ENSMUST00000117891 372 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm14594-201ENSMUST00000118052 537 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Gm15025-201ENSMUST00000118434 418 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm14590-201ENSMUST00000118934 537 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm11862-201ENSMUST00000119678 659 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm14362-201ENSMUST00000121679 273 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm15075-201ENSMUST00000122187 477 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm6081-201ENSMUST00000134472 489 ntBASIC5.64□□□□□ -1.51
GdnfP48540 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GdnfP48540 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm15254-201ENSMUST00000149567 273 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm25281-201ENSMUST00000157270 104 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm25717-201ENSMUST00000158631 353 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm22261-201ENSMUST00000158691 324 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
GdnfP48540 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm24810-201ENSMUST00000175317 70 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm24897-201ENSMUST00000179033 107 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm14596-201ENSMUST00000180268 537 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm14595-201ENSMUST00000180335 537 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm4832-201ENSMUST00000182679 399 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm27999-201ENSMUST00000183539 193 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
GdnfP48540 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm44342-201ENSMUST00000196874 129 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm44383-201ENSMUST00000198940 129 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.64□□□□□ -1.51
GdnfP48540 Gm44041-201ENSMUST00000203678 396 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm3549-201ENSMUST00000203873 794 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm44147-201ENSMUST00000204658 94 ntBASIC5.64□□□□□ -1.51
GdnfP48540 Gm19252-201ENSMUST00000204705 305 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms