Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.97□□□□□ -1.61
Cxcl12P40224 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cxcl12P40224 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Cxcl12P40224 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cxcl12P40224 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cxcl12P40224 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Cxcl12P40224 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Cxcl12P40224 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Cxcl12P40224 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.96□□□□□ -1.61
Cxcl12P40224 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Cxcl12P40224 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.96□□□□□ -1.61
Cxcl12P40224 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Cxcl12P40224 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Cxcl12P40224 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
Cxcl12P40224 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
Cxcl12P40224 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm44843-201ENSMUST00000208320 1396 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm15385-201ENSMUST00000118725 667 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm25386-201ENSMUST00000157814 288 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm28304-201ENSMUST00000185977 312 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm29256-201ENSMUST00000189094 312 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.96□□□□□ -1.62
Cxcl12P40224 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm28484-201ENSMUST00000190606 312 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm44134-202ENSMUST00000204777 545 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm18258-201ENSMUST00000210413 542 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cxcl12P40224 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.96□□□□□ -1.62
Cxcl12P40224 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Cxcl12P40224 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Cxcl12P40224 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm14706-201ENSMUST00000117744 255 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm11394-201ENSMUST00000181421 517 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm27883-201ENSMUST00000183941 102 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm6802-202ENSMUST00000186566 126 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm9057-201ENSMUST00000198791 296 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm4574-201ENSMUST00000207804 542 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm10705-201ENSMUST00000098980 461 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Cxcl12P40224 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm45424-201ENSMUST00000210575 3300 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.95□□□□□ -1.62
Cxcl12P40224 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cxcl12P40224 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cxcl12P40224 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cxcl12P40224 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.94□□□□□ -1.62
Cxcl12P40224 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.94□□□□□ -1.62
Cxcl12P40224 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cxcl12P40224 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms