Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.85□□□□□ -1.47
Traf1P39428 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.85□□□□□ -1.47
Traf1P39428 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Mir292-201ENSMUST00000104847 82 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm12734-201ENSMUST00000120228 948 ntBASIC5.85□□□□□ -1.47
Traf1P39428 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.85□□□□□ -1.47
Traf1P39428 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Gm22870-201ENSMUST00000157501 112 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm3531-201ENSMUST00000162698 489 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Trbv10-201ENSMUST00000168322 289 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm6647-201ENSMUST00000170514 641 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Gm27820-201ENSMUST00000183628 175 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm28385-201ENSMUST00000185671 292 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm28967-201ENSMUST00000187351 281 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm28957-201ENSMUST00000190174 373 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm44307-201ENSMUST00000204466 764 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Traf1P39428 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Traf1P39428 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.85□□□□□ -1.47
Traf1P39428 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Mir342-201ENSMUST00000083502 99 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Traf1P39428 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Traf1P39428 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.85□□□□□ -1.47
Traf1P39428 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Traf1P39428 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.84□□□□□ -1.47
Traf1P39428 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Traf1P39428 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Traf1P39428 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Traf1P39428 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Gm13321-201ENSMUST00000117101 400 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm16179-201ENSMUST00000120685 373 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm13149-201ENSMUST00000122071 339 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm26371-201ENSMUST00000157829 104 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm22804-201ENSMUST00000158052 101 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm16456-201ENSMUST00000174431 920 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm6717-201ENSMUST00000185549 838 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm18177-201ENSMUST00000188373 404 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Gm43794-201ENSMUST00000200971 692 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm42666-201ENSMUST00000201954 152 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm6906-201ENSMUST00000218014 569 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.84□□□□□ -1.47
Traf1P39428 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.84□□□□□ -1.47
Traf1P39428 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Gm5457-201ENSMUST00000022260 333 ntBASIC5.84□□□□□ -1.47
Traf1P39428 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.84□□□□□ -1.47
Traf1P39428 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.84□□□□□ -1.47
Traf1P39428 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.84□□□□□ -1.47
Traf1P39428 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.84□□□□□ -1.47
Traf1P39428 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Traf1P39428 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Traf1P39428 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Traf1P39428 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Traf1P39428 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Traf1P39428 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Traf1P39428 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.83□□□□□ -1.48
Traf1P39428 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms