Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.1□□□□□ -1.59
Lire1P11260 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.1□□□□□ -1.59
Lire1P11260 Gm18036-201ENSMUST00000195256 272 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm17954-201ENSMUST00000195893 607 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm43779-201ENSMUST00000196691 829 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm5309-201ENSMUST00000197416 677 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm4859-201ENSMUST00000199625 787 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.1□□□□□ -1.59
Lire1P11260 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm45078-201ENSMUST00000205343 546 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.1□□□□□ -1.59
Lire1P11260 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Lire1P11260 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Mir188-201ENSMUST00000083464 68 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Mir331-201ENSMUST00000083673 96 ntBASIC5.1□□□□□ -1.59
Lire1P11260 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.1□□□□□ -1.59
Lire1P11260 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.1□□□□□ -1.59
Lire1P11260 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lire1P11260 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lire1P11260 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm23424-201ENSMUST00000103889 110 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm23750-201ENSMUST00000104222 132 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm11313-201ENSMUST00000118779 432 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm13687-201ENSMUST00000119857 282 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm13787-201ENSMUST00000120422 168 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm13537-201ENSMUST00000120467 267 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm13788-201ENSMUST00000120767 601 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.09□□□□□ -1.59
Lire1P11260 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm8224-201ENSMUST00000166178 497 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm7335-201ENSMUST00000172475 373 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm18343-201ENSMUST00000172802 604 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm22917-201ENSMUST00000180116 110 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.09□□□□□ -1.59
Lire1P11260 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.09□□□□□ -1.59
Lire1P11260 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm43276-201ENSMUST00000199712 364 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm45082-201ENSMUST00000206082 601 ntBASIC5.09□□□□□ -1.59
Lire1P11260 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Gm45525-201ENSMUST00000210800 389 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm4928-201ENSMUST00000219622 850 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm7042-201ENSMUST00000223027 384 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.09□□□□□ -1.59
Lire1P11260 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lire1P11260 Gm10064-201ENSMUST00000071235 399 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Snord21-201ENSMUST00000082519 94 ntBASIC5.09□□□□□ -1.59
Lire1P11260 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lire1P11260 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Lire1P11260 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.09□□□□□ -1.6
Lire1P11260 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Lire1P11260 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.08□□□□□ -1.6
Lire1P11260 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms