Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm38067-201ENSMUST00000192346 1911 ntBASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ccdc180J3QNE4 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm23481-201ENSMUST00000104173 131 ntBASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm15189-201ENSMUST00000121164 1966 ntBASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm15624-203ENSMUST00000204811 3402 ntBASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm43921-201ENSMUST00000204296 1792 ntBASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Gm37749-201ENSMUST00000193917 1899 ntBASIC8.65□□□□□ -1.02
Ccdc180J3QNE4 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm23709-201ENSMUST00000104364 130 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm12852-201ENSMUST00000119478 719 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm10444-201ENSMUST00000126708 148 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm22819-201ENSMUST00000157445 303 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm18181-201ENSMUST00000190670 736 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm44038-201ENSMUST00000203952 889 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm6261-201ENSMUST00000204707 760 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 AC132315.1-201ENSMUST00000221771 390 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 AC174459.2-201ENSMUST00000226036 160 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Ear-ps9-202ENSMUST00000226796 245 ntBASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc180J3QNE4 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm43210-201ENSMUST00000196743 6152 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm27805-201ENSMUST00000184513 79 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm8823-201ENSMUST00000193158 433 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Snord22-201ENSMUST00000083153 126 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 AC108802.1-201ENSMUST00000219501 3142 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC8.64□□□□□ -1.03
Ccdc180J3QNE4 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm42702-201ENSMUST00000199515 4217 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm13195-201ENSMUST00000117229 261 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm12719-201ENSMUST00000118859 241 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm24224-201ENSMUST00000158828 258 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm3145-201ENSMUST00000188584 220 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.63□□□□□ -1.03
Ccdc180J3QNE4 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm11878-201ENSMUST00000117908 400 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm15385-201ENSMUST00000118725 667 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm13787-201ENSMUST00000120422 168 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm30280-201ENSMUST00000192214 262 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm42999-201ENSMUST00000198049 786 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm18462-201ENSMUST00000208112 417 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm14610-201ENSMUST00000118358 966 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm26362-201ENSMUST00000158865 315 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm43370-201ENSMUST00000196437 284 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm43710-201ENSMUST00000199583 452 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm21461-201ENSMUST00000200382 863 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 AC132433.1-201ENSMUST00000221553 1101 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Gm44742-201ENSMUST00000207190 1412 ntBASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ccdc180J3QNE4 AC153532.3-201ENSMUST00000218660 3848 ntBASIC8.61□□□□□ -1.03
Ccdc180J3QNE4 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc180J3QNE4 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc180J3QNE4 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms