Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.7□□□□□ -1.66
Trim3Q9R1R2 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm23746-201ENSMUST00000104229 125 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm14512-201ENSMUST00000117924 230 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm13172-201ENSMUST00000118685 256 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm15791-201ENSMUST00000120365 319 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm13532-201ENSMUST00000120373 240 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm14369-201ENSMUST00000121355 285 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm22226-201ENSMUST00000157355 109 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm22084-201ENSMUST00000157585 105 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm22725-201ENSMUST00000158092 110 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Scarna6-201ENSMUST00000158656 265 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Trbv10-201ENSMUST00000168322 289 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Mir6903-201ENSMUST00000183597 88 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Mir7012-201ENSMUST00000183900 64 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm9320-201ENSMUST00000184151 473 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm6075-201ENSMUST00000186816 486 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm44184-201ENSMUST00000204290 132 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm45171-201ENSMUST00000206360 736 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Mir31-201ENSMUST00000083474 106 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm7676-201ENSMUST00000084055 319 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim3Q9R1R2 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm14725-201ENSMUST00000120324 828 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm25293-201ENSMUST00000122792 285 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm15838-201ENSMUST00000161575 180 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm20397-201ENSMUST00000174520 362 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm27543-201ENSMUST00000183562 177 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm28974-201ENSMUST00000187893 231 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm29813-201ENSMUST00000195856 447 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm43408-201ENSMUST00000198263 440 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm44603-201ENSMUST00000206820 367 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm18924-201ENSMUST00000211929 316 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm26330-201ENSMUST00000082817 104 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm22741-201ENSMUST00000083438 165 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim3Q9R1R2 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms