Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm5139-201ENSMUST00000175943 249 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm2497-201ENSMUST00000189539 601 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm42666-201ENSMUST00000201954 152 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm9038-201ENSMUST00000203400 604 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm19201-201ENSMUST00000210127 778 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm19189-201ENSMUST00000221689 754 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm9512-201ENSMUST00000223112 497 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm4963-201ENSMUST00000072718 378 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Lima1Q9ERG0 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm14610-201ENSMUST00000118358 966 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm12731-201ENSMUST00000120932 268 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Mir6911-201ENSMUST00000184241 69 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm5842-201ENSMUST00000195073 622 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm19617-201ENSMUST00000202977 308 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm44221-201ENSMUST00000203552 388 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm2011-203ENSMUST00000203750 435 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm20368-201ENSMUST00000220716 301 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm7040-201ENSMUST00000223271 443 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Nsa2-203ENSMUST00000225410 974 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm5045-201ENSMUST00000027054 810 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm23514-201ENSMUST00000082827 130 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm22741-201ENSMUST00000083438 165 ntBASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Lima1Q9ERG0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm14385-201ENSMUST00000116315 876 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm11790-201ENSMUST00000119569 455 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm25293-201ENSMUST00000122792 285 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm25906-201ENSMUST00000158489 126 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm5258-201ENSMUST00000165437 327 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Mir5110-201ENSMUST00000175537 87 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Mir6343-201ENSMUST00000183584 84 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Mir7012-201ENSMUST00000183900 64 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm28957-201ENSMUST00000190174 373 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm45171-201ENSMUST00000206360 736 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm7822-201ENSMUST00000222433 581 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Mir99a-201ENSMUST00000083596 65 ntBASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Lima1Q9ERG0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms