Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm4052-201ENSMUST00000220890 451 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm6474-201ENSMUST00000223250 699 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Mir465-201ENSMUST00000093563 74 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ddx56Q9D0R4 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm7855-201ENSMUST00000137737 687 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm6872-201ENSMUST00000165001 700 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm6647-201ENSMUST00000170514 641 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Mir5106-201ENSMUST00000174936 73 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm22993-201ENSMUST00000175423 254 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm19029-201ENSMUST00000189923 564 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm37543-201ENSMUST00000192443 1031 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm18692-201ENSMUST00000193047 511 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm43973-201ENSMUST00000203562 210 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ddx56Q9D0R4 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Gm23431-201ENSMUST00000104006 107 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.87□□□□□ -1.47
Ddx56Q9D0R4 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms