Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm14670-201ENSMUST00000117327 337 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm8501-201ENSMUST00000117684 432 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm15193-201ENSMUST00000120224 865 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm5287-201ENSMUST00000120666 598 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm11848-201ENSMUST00000121207 973 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm13808-201ENSMUST00000121353 184 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm13409-201ENSMUST00000122072 546 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm15899-201ENSMUST00000128586 238 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm25559-201ENSMUST00000157182 74 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm24969-201ENSMUST00000180331 79 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm28016-201ENSMUST00000184594 196 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Mir7058-201ENSMUST00000184637 75 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm29281-201ENSMUST00000188077 381 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm44465-201ENSMUST00000199536 114 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm9245-201ENSMUST00000200528 983 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm9685-201ENSMUST00000211275 538 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm23614-201ENSMUST00000082598 107 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm24041-201ENSMUST00000083115 156 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim11Q99PQ2 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Mir466n-201ENSMUST00000104798 94 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm12016-201ENSMUST00000119079 681 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm15266-201ENSMUST00000119635 255 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm12308-201ENSMUST00000120440 389 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm14638-201ENSMUST00000121338 216 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm12438-201ENSMUST00000122034 336 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm14747-201ENSMUST00000149888 984 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Snora47-201ENSMUST00000157483 138 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm24939-201ENSMUST00000158325 137 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm18522-201ENSMUST00000173947 650 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm37774-201ENSMUST00000194401 245 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm37358-201ENSMUST00000195492 479 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm45192-201ENSMUST00000206749 283 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm44927-201ENSMUST00000207573 716 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm7413-201ENSMUST00000219498 462 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm10095-201ENSMUST00000222765 483 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm24460-201ENSMUST00000082731 106 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm24043-201ENSMUST00000083108 116 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim11Q99PQ2 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms