Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm14932-201ENSMUST00000117112 453 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm5401-201ENSMUST00000122444 365 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm26401-201ENSMUST00000158502 76 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm17194-201ENSMUST00000164610 348 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm23162-201ENSMUST00000175081 121 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Mir5110-201ENSMUST00000175537 87 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm18698-201ENSMUST00000192327 668 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm42474-201ENSMUST00000201073 505 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm4057-201ENSMUST00000221407 368 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm4012-201ENSMUST00000221504 581 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm7529-201ENSMUST00000213753 1897 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Brf1Q8CFK2 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm8424-201ENSMUST00000117716 988 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm12677-201ENSMUST00000118668 426 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm7657-201ENSMUST00000118851 666 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm12287-201ENSMUST00000119770 707 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm11197-201ENSMUST00000145158 839 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm25865-201ENSMUST00000158247 104 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm27037-201ENSMUST00000182270 960 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm2325-201ENSMUST00000186637 581 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm9541-201ENSMUST00000188409 502 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm37492-201ENSMUST00000191948 376 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm43345-201ENSMUST00000199484 269 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm18855-201ENSMUST00000206689 570 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm4587-201ENSMUST00000209135 637 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm7768-201ENSMUST00000222988 597 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm24035-201ENSMUST00000082867 107 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm43178-201ENSMUST00000197257 1386 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Brf1Q8CFK2 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.25□□□□□ -1.41
Brf1Q8CFK2 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms