Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm25187-201ENSMUST00000083906 133 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc28aQ8CEI3 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm22273-201ENSMUST00000104040 132 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm25048-201ENSMUST00000158598 91 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm21959-201ENSMUST00000178439 452 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm28830-201ENSMUST00000188192 213 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm36939-201ENSMUST00000194889 439 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm22897-202ENSMUST00000197782 127 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm19104-201ENSMUST00000198392 679 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm3086-202ENSMUST00000221248 310 ntBASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28aQ8CEI3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14485-201ENSMUST00000119489 493 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm11481-201ENSMUST00000120069 255 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm5391-201ENSMUST00000121155 613 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm22968-201ENSMUST00000157955 118 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm24860-201ENSMUST00000158457 276 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm24675-201ENSMUST00000158757 259 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm26993-201ENSMUST00000182766 789 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm27960-201ENSMUST00000183445 184 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm18350-201ENSMUST00000187395 955 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm28769-201ENSMUST00000190176 615 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm42720-201ENSMUST00000196813 300 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Gm14861-201ENSMUST00000119451 455 ntBASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.86□□□□□ -1.63
Ccdc28aQ8CEI3 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms