Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir6418-201ENSMUST00000185075 115 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm9442-201ENSMUST00000194242 319 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm8999-201ENSMUST00000204951 969 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm32536-201ENSMUST00000205209 445 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Snora52-201ENSMUST00000082732 137 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25821-201ENSMUST00000093657 133 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm23058-201ENSMUST00000093703 107 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Neat1-201ENSMUST00000173672 20771 ntBASIC4.83□□□□□ -1.64
Ccdc28bQ8CEG5 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm11584-201ENSMUST00000120636 325 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm12833-201ENSMUST00000136112 477 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm23441-201ENSMUST00000157268 127 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22968-201ENSMUST00000157955 118 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm22518-201ENSMUST00000158267 68 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm16571-201ENSMUST00000159112 291 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm6808-201ENSMUST00000162341 807 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm17937-201ENSMUST00000197908 742 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm44281-201ENSMUST00000203090 166 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45215-201ENSMUST00000206407 395 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm18306-201ENSMUST00000207338 569 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45200-201ENSMUST00000207434 919 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc28bQ8CEG5 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Fus-202ENSMUST00000079045 2623 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13532-201ENSMUST00000120373 240 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm13000-201ENSMUST00000120937 496 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15212-201ENSMUST00000122403 466 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm25109-201ENSMUST00000122474 114 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC4.81□□□□□ -1.64
Ccdc28bQ8CEG5 Gm15279-201ENSMUST00000155593 288 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms