Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24193-201ENSMUST00000116801 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24744-201ENSMUST00000116833 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24427-201ENSMUST00000116896 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22346-201ENSMUST00000116918 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm23606-201ENSMUST00000116938 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22029-201ENSMUST00000116940 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm26298-201ENSMUST00000116956 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm23844-201ENSMUST00000116959 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24484-201ENSMUST00000117009 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25347-201ENSMUST00000117026 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22112-201ENSMUST00000117032 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm7657-201ENSMUST00000118851 666 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm16463-201ENSMUST00000120527 721 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25714-201ENSMUST00000158626 296 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22991-201ENSMUST00000178126 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25754-201ENSMUST00000178653 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm22419-201ENSMUST00000178780 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24802-201ENSMUST00000178897 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25208-201ENSMUST00000178964 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm24567-201ENSMUST00000179294 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm23943-201ENSMUST00000179712 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm25228-201ENSMUST00000180121 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm23304-201ENSMUST00000180209 121 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm42428-201ENSMUST00000198677 302 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm42459-201ENSMUST00000199679 742 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm44259-201ENSMUST00000204996 298 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm4574-201ENSMUST00000207804 542 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.8□□□□□ -1.48
Nup88Q8CEC0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Nup88Q8CEC0 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm22676-201ENSMUST00000116972 129 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm12683-201ENSMUST00000117528 415 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm15057-201ENSMUST00000121516 534 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm26153-201ENSMUST00000157433 127 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm22600-201ENSMUST00000157598 269 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm3531-201ENSMUST00000162698 489 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm44261-201ENSMUST00000203337 209 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm29785-201ENSMUST00000217033 383 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Mir338-201ENSMUST00000083666 98 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 AC122408.2-201ENSMUST00000217901 1391 ntBASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Nup88Q8CEC0 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.78□□□□□ -1.48
Nup88Q8CEC0 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms