Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm24541-201ENSMUST00000103871 96 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm24230-201ENSMUST00000104313 129 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm14521-201ENSMUST00000119545 350 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm15390-201ENSMUST00000120323 738 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm22730-201ENSMUST00000158085 171 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Mir6416-201ENSMUST00000183664 117 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm29556-201ENSMUST00000187591 696 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm37837-201ENSMUST00000191743 604 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm34176-201ENSMUST00000192621 474 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm44776-201ENSMUST00000207212 381 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm18924-201ENSMUST00000211929 316 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc38Q8CDN8 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm22261-201ENSMUST00000158691 324 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm24561-201ENSMUST00000175182 95 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm42652-201ENSMUST00000199073 614 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm32453-201ENSMUST00000204183 456 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm2099-201ENSMUST00000220979 412 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc38Q8CDN8 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm25419-201ENSMUST00000104215 191 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 H3f3c-201ENSMUST00000119459 411 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm14369-201ENSMUST00000121355 285 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm22343-201ENSMUST00000122648 286 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm3008-201ENSMUST00000160566 571 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm5777-201ENSMUST00000177265 448 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm27036-201ENSMUST00000182465 980 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Olfr151-202ENSMUST00000221099 929 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.5□□□□□ -1.53
Ccdc38Q8CDN8 Gm5045-201ENSMUST00000027054 810 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms