Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm4602-201ENSMUST00000203198 308 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm24031-201ENSMUST00000083930 131 ntBASIC4.83□□□□□ -1.64
Trub1Q8C0D0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trub1Q8C0D0 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm38126-201ENSMUST00000195297 4003 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm13162-201ENSMUST00000121481 454 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm14784-201ENSMUST00000121604 663 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm7840-201ENSMUST00000122086 533 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm24188-201ENSMUST00000157980 108 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm25923-201ENSMUST00000158312 138 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm16378-201ENSMUST00000179168 342 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm43144-201ENSMUST00000198256 485 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm32308-201ENSMUST00000203053 280 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm44184-201ENSMUST00000204290 132 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm44237-201ENSMUST00000205183 936 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm17811-201ENSMUST00000206193 387 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm22220-201ENSMUST00000082671 149 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Mir17-201ENSMUST00000083574 84 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.82□□□□□ -1.64
Trub1Q8C0D0 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.82□□□□□ -1.64
Trub1Q8C0D0 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm23709-201ENSMUST00000104364 130 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm11984-201ENSMUST00000118142 766 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm15493-201ENSMUST00000119461 528 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm24774-201ENSMUST00000157384 134 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm37272-201ENSMUST00000193401 488 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm8069-201ENSMUST00000197887 154 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm43005-201ENSMUST00000199015 648 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm23626-201ENSMUST00000082458 133 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm25821-201ENSMUST00000093657 133 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm37677-201ENSMUST00000194520 7634 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.81□□□□□ -1.64
Trub1Q8C0D0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trub1Q8C0D0 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 129.7 ms