Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Herc4Q6PAV2 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Herc4Q6PAV2 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm22312-201ENSMUST00000158005 130 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm22355-201ENSMUST00000175531 96 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Herc4Q6PAV2 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Mir193b-201ENSMUST00000103784 79 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm13250-201ENSMUST00000117209 753 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Mir5103-201ENSMUST00000175111 79 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm18117-201ENSMUST00000187720 742 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm8891-201ENSMUST00000198546 832 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm43974-201ENSMUST00000205080 684 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm4574-201ENSMUST00000207804 542 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm3816-201ENSMUST00000209803 433 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.32□□□□□ -1.56
Herc4Q6PAV2 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm9427-201ENSMUST00000116187 651 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm11346-201ENSMUST00000118346 704 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm3757-201ENSMUST00000125878 675 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm23046-201ENSMUST00000158369 284 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm24561-201ENSMUST00000175182 95 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm25019-201ENSMUST00000179732 110 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gm8614-201ENSMUST00000182528 978 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Herc4Q6PAV2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms