Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.23□□□□□ -1.57
Col8a1Q00780 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm25667-201ENSMUST00000157701 275 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm20648-201ENSMUST00000175815 328 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm15143-201ENSMUST00000178180 714 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm27522-201ENSMUST00000183949 230 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm18291-201ENSMUST00000190791 301 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm28640-201ENSMUST00000190918 550 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Igkv15-97-201ENSMUST00000197637 339 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm44382-201ENSMUST00000198683 122 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Mir219c-201ENSMUST00000199860 60 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm18781-201ENSMUST00000211252 924 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.23□□□□□ -1.57
Col8a1Q00780 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm6049-201ENSMUST00000222369 458 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.23□□□□□ -1.57
Col8a1Q00780 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC5.23□□□□□ -1.57
Col8a1Q00780 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Col8a1Q00780 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Col8a1Q00780 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Mir708-201ENSMUST00000102189 109 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Mir466n-201ENSMUST00000104798 94 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm25111-201ENSMUST00000116686 147 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm14365-201ENSMUST00000117535 587 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm11972-201ENSMUST00000118514 389 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm11869-201ENSMUST00000118701 329 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm13887-201ENSMUST00000119009 344 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm13222-201ENSMUST00000119638 138 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm8545-201ENSMUST00000120692 801 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm13998-201ENSMUST00000120952 335 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm12685-201ENSMUST00000121702 214 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm23669-201ENSMUST00000157470 128 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm25434-201ENSMUST00000158278 167 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm25489-201ENSMUST00000158727 141 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm6395-201ENSMUST00000167639 691 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col8a1Q00780 Mir6992-201ENSMUST00000183342 109 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm21728-201ENSMUST00000188442 695 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm21889-201ENSMUST00000188487 695 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm21920-201ENSMUST00000190042 695 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col8a1Q00780 Mir6375-201ENSMUST00000197176 95 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm43276-201ENSMUST00000199712 364 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.22□□□□□ -1.57
Col8a1Q00780 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms