Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm6382-201ENSMUST00000118873 942 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm43037-201ENSMUST00000196808 250 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 AW046200-203ENSMUST00000211787 2479 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm14299-201ENSMUST00000117586 397 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm12885-201ENSMUST00000122246 328 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm22816-201ENSMUST00000157450 117 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm26404-201ENSMUST00000158498 109 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm4540-201ENSMUST00000170669 429 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Mir6345-201ENSMUST00000184286 128 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.17□□□□□ -1.9
PrkdcP97313 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.17□□□□□ -1.9
PrkdcP97313 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm5750-201ENSMUST00000218711 801 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm7119-201ENSMUST00000221345 695 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm25481-201ENSMUST00000083221 158 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm37212-201ENSMUST00000192582 3650 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm43314-201ENSMUST00000196744 2231 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PrkdcP97313 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm22498-201ENSMUST00000104497 86 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm14082-201ENSMUST00000118582 801 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm11325-201ENSMUST00000119967 469 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm25667-201ENSMUST00000157701 275 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm10357-201ENSMUST00000159886 264 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm29452-201ENSMUST00000187996 313 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm28860-201ENSMUST00000188103 313 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PrkdcP97313 Gm6828-201ENSMUST00000207902 1186 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Gm44600-201ENSMUST00000208540 111 ntBASIC3.17□□□□□ -1.9
PrkdcP97313 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 CT025675.1-201ENSMUST00000228171 1567 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm43283-201ENSMUST00000199138 2548 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm15783-201ENSMUST00000117521 633 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm22514-201ENSMUST00000122547 308 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm24627-201ENSMUST00000122764 138 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Mir1251-201ENSMUST00000175486 84 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
PrkdcP97313 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PrkdcP97313 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm37767-201ENSMUST00000193239 1834 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.16□□□□□ -1.9
PrkdcP97313 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PrkdcP97313 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PrkdcP97313 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms