Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb1P63158 Gm45211-201ENSMUST00000206208 2650 ntBASIC6.22□□□□□ -1.41
Hmgb1P63158 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
Hmgb1P63158 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Hmgb1P63158 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
Hmgb1P63158 Gm44829-201ENSMUST00000208008 3193 ntBASIC6.21□□□□□ -1.41
Hmgb1P63158 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm42552-201ENSMUST00000196754 4497 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm24434-201ENSMUST00000104081 132 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm12193-201ENSMUST00000117250 379 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm5942-201ENSMUST00000120046 439 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm15781-201ENSMUST00000120216 323 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm14939-201ENSMUST00000120347 680 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm5405-201ENSMUST00000120478 609 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm26254-201ENSMUST00000122491 118 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm25555-201ENSMUST00000158078 111 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm24664-201ENSMUST00000158939 100 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm16164-201ENSMUST00000160078 468 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm5050-201ENSMUST00000197164 775 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm2623-201ENSMUST00000199229 286 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm44432-201ENSMUST00000203342 938 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm23447-201ENSMUST00000082798 163 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm42551-201ENSMUST00000197701 1573 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.21□□□□□ -1.42
Hmgb1P63158 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb1P63158 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb1P63158 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb1P63158 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Hmgb1P63158 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm25917-201ENSMUST00000104267 130 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm16423-201ENSMUST00000120078 947 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm15331-201ENSMUST00000120225 385 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm7571-201ENSMUST00000120252 927 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm12327-201ENSMUST00000121729 1168 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm23387-201ENSMUST00000158586 107 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.2□□□□□ -1.42
Hmgb1P63158 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm6113-201ENSMUST00000180319 639 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm29663-201ENSMUST00000186962 853 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm43629-201ENSMUST00000201782 704 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm18467-201ENSMUST00000208805 434 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm45690-201ENSMUST00000210775 246 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm7034-201ENSMUST00000218638 645 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC6.2□□□□□ -1.42
Hmgb1P63158 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.2□□□□□ -1.42
Hmgb1P63158 AC090496.1-201ENSMUST00000226020 260 ntBASIC6.2□□□□□ -1.42
Hmgb1P63158 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms