Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm25093-201ENSMUST00000103993 132 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm25877-201ENSMUST00000104326 129 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.52□□□□□ -1.53
Sf3b6P59708 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm14173-201ENSMUST00000117690 278 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm13455-201ENSMUST00000118767 517 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm12935-201ENSMUST00000119352 246 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm16511-201ENSMUST00000120019 564 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm14903-201ENSMUST00000122435 537 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm11197-201ENSMUST00000145158 839 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm23435-201ENSMUST00000157183 156 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Mir7093-201ENSMUST00000184195 101 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm29105-201ENSMUST00000187256 450 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm28846-201ENSMUST00000189161 368 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm8009-201ENSMUST00000191672 436 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm7019-201ENSMUST00000194122 369 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm19089-201ENSMUST00000197207 613 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm42924-201ENSMUST00000197261 185 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm32983-201ENSMUST00000208500 505 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm10264-201ENSMUST00000220589 429 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.52□□□□□ -1.53
Sf3b6P59708 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Sf3b6P59708 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm26422-201ENSMUST00000104276 132 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm24989-201ENSMUST00000104461 88 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm11970-201ENSMUST00000116105 320 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm12468-201ENSMUST00000116189 404 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm15216-201ENSMUST00000118058 277 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm14750-201ENSMUST00000118262 516 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm14614-201ENSMUST00000119873 384 ntBASIC5.51□□□□□ -1.53
Sf3b6P59708 Gm11882-201ENSMUST00000121463 506 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms