Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Cdx2P43241 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC4.63□□□□□ -1.67
Cdx2P43241 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm22473-201ENSMUST00000104114 132 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm14831-201ENSMUST00000120253 409 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm24251-201ENSMUST00000157324 114 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm16107-201ENSMUST00000162523 862 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm36991-201ENSMUST00000191800 648 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm38221-201ENSMUST00000195146 365 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm9057-201ENSMUST00000198791 296 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.63□□□□□ -1.67
Cdx2P43241 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Cdx2P43241 Snord22-201ENSMUST00000083153 126 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm10705-201ENSMUST00000098980 461 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Cdx2P43241 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.63□□□□□ -1.67
Cdx2P43241 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Cdx2P43241 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Cdx2P43241 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Cdx2P43241 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm24507-201ENSMUST00000157683 134 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm3077-201ENSMUST00000165903 627 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Mir7222-201ENSMUST00000183740 75 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm27414-201ENSMUST00000185033 381 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm5252-201ENSMUST00000189030 909 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm37243-201ENSMUST00000193407 595 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Cdx2P43241 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm6863-201ENSMUST00000052882 636 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdx2P43241 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
Cdx2P43241 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.62□□□□□ -1.67
Cdx2P43241 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Cdx2P43241 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Cdx2P43241 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Cdx2P43241 Mir761-201ENSMUST00000103245 76 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm13172-201ENSMUST00000118685 256 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm14985-201ENSMUST00000118693 786 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Gm13924-201ENSMUST00000119899 486 ntBASIC4.61□□□□□ -1.67
Cdx2P43241 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms